Transcript: URB1-AS1:1

Basic information

LNCipedia transcript ID: URB1-AS1:1 
HGNC Gene Symbol: URB1-AS1    
HGNC Full Gene Name: URB1 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000256073
Ensembl Transcript ID: ENST00000534991
Location (hg38): chr21:32393130-32393960
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 831 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000534991.3
Alternative gene names: ENSG00000256073.3; URB1-AS1; PRED84; MGC14136


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -73.4021 non-coding 
CPAT coding probability 12.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
URB1-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 URB1-AS1:1
4.1 URB1-AS1:1
5.0 URB1-AS1:1
5.1 URB1-AS1:1
5.2 URB1-AS1:1