Transcript: USP12-AS1:1

Basic information

LNCipedia transcript ID: USP12-AS1:1 
LNCipedia gene ID: USP12-AS1
RefSeq ID: NR_046547
Location (hg38): chr13:27125533-27169135
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 307 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046547; NR_046547.1
Alternative gene names: ; USP12-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.885 non-coding 
CPAT coding probability 8.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
USP12-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL21-2:2
4.0 USP12-AS1:1
4.1 USP12-AS1:1
5.0 USP12-AS1:1
5.1 USP12-AS1:1
5.2 USP12-AS1:1