Transcript: USP3-AS1:10

Basic information

LNCipedia transcript ID: USP3-AS1:10 
LNCipedia gene ID: USP3-AS1
Location (hg38): chr15:63591114-63600739
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 465 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000560622.1; RP11-265M18.2-008; OTTHUMT00000418520.1
Alternative gene names: ENSG00000259248.1; RP11-265M18.2; OTTHUMG00000172432.1; USP3-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -263.0768 non-coding 
CPAT coding probability 4.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
USP3-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HERC1-1:7
4.0 USP3-AS1:10
4.1 USP3-AS1:10
5.0 USP3-AS1:10
5.1 USP3-AS1:10
5.2 USP3-AS1:10