Transcript: VASH1-AS1:12

Basic information

LNCipedia transcript ID: VASH1-AS1:12 
LNCipedia gene ID: VASH1-AS1
Location (hg38): chr14:76781740-76786724
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1677 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000556072; ENST00000556072.1; RP11-488C13.5-001; OTTHUMT00000414491.1; NONHSAT140171
Alternative gene names: ENSG00000258301; RP11-488C13.5; ENSG00000258301.2; OTTHUMG00000171623.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.0031 non-coding 
CPAT coding probability 6.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
VASH1-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANGEL1-1:2
3.1 lnc-ANGEL1-1:2
4.0 lnc-ANGEL1-1:2
4.1 lnc-ANGEL1-1:2
5.0 lnc-ANGEL1-1:2
5.1 VASH1-AS1:3
5.2 VASH1-AS1:12