Transcript: VASH1-AS1:13

Basic information

LNCipedia transcript ID: VASH1-AS1:13 
HGNC Gene Symbol: VASH1-AS1    
HGNC Full Gene Name: VASH1 antisense RNA 1
Ensembl Gene ID: ENSG00000258301
Ensembl Transcript ID: ENST00000556072
RefSeq ID: NR_104184
Location (hg38): chr14:76781733-76786724
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1684 bp
Exons: 2
Sources: Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104184; ENST00000556072.2; NR_104184.1
Alternative gene names: ENSG00000258301.3; RP11-488C13.5; VASH1-AS1; LOC100506603


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.0031 non-coding 
CPAT coding probability 6.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
VASH1-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGEL1-1:5
4.0 lnc-ANGEL1-1:5
4.1 lnc-ANGEL1-1:5
5.0 lnc-ANGEL1-1:5
5.1 VASH1-AS1:4
5.2 VASH1-AS1:13