Transcript: VASH1-AS1:16

Basic information

LNCipedia transcript ID: VASH1-AS1:16 
LNCipedia gene ID: VASH1-AS1
Location (hg38): chr14:76781020-76786404
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1731 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT037925
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.0031 non-coding 
CPAT coding probability 6.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
VASH1-AS1:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANGEL1-1:7
4.0 lnc-ANGEL1-1:7
4.1 lnc-ANGEL1-1:7
5.0 lnc-ANGEL1-1:7
5.1 VASH1-AS1:7
5.2 VASH1-AS1:16