Transcript: VLDLR-AS1:3
Basic information
LNCipedia transcript ID: VLDLR-AS1:3
HGNC Gene Symbol: VLDLR-AS1
HGNC Full Gene Name:
VLDLR antisense RNA 1
Ensembl Gene ID:
ENSG00000236404
Ensembl Transcript ID:
ENST00000453601
RefSeq ID:
NR_015375
Location (hg38): chr9:2535652-2622373
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 887 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000453601; ENST00000453601.1; RP11-125B21.2-002; OTTHUMT00000051525.1; NONHSAT129999; ENST00000453601.5; NR_015375.2
Alternative gene names: ENSG00000236404; RP11-125B21.2; ENSG00000236404.2; OTTHUMG00000019448.1; ENSG00000236404.4; ENSG00000236404.8; VLDLR-AS1; ; lincRNA-VLDLR
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Takahashi (2014), Involvement of extracellular vesicle long noncoding RNA (linc-VLDLR) in tumor cell responses to chemotherapy., Mol. Cancer Res.
- Loewer (2010), Large intergenic non-coding RNA-RoR modulates reprogramming of human induced pluripotent stem cells., Nat. Genet.
LNCipedia transcript ID history
LNCipedia version | LNCipedia transcript ID |
---|---|
1.3 | lnc-KIAA0020-1:1 |
3.1 | lnc-KIAA0020-1:1 |
4.0 | VLDLR-AS1:3 |
4.1 | VLDLR-AS1:3 |
5.0 | VLDLR-AS1:3 |
5.1 | VLDLR-AS1:3 |
5.2 | VLDLR-AS1:3 |