Transcript: VWA8-AS1:3

Basic information

LNCipedia transcript ID: VWA8-AS1:3 
HGNC Gene Symbol: VWA8-AS1    
HGNC Full Gene Name: VWA8 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000278338
Ensembl Transcript ID: ENST00000611103
RefSeq ID: NR_039974
Location (hg38): chr13:41961169-41981565
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2079 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT033421; NR_039974; ENST00000611103.1; NR_039974.1
Alternative gene names: ENSG00000278338.4; VWA8-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.7197 non-coding 
CPAT coding probability 9.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
VWA8-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DGKH-2:2
4.0 VWA8-AS1:3
4.1 VWA8-AS1:3
5.0 VWA8-AS1:3
5.1 VWA8-AS1:3
5.2 VWA8-AS1:3