Transcript: WARS2-IT1:1

Basic information

LNCipedia transcript ID: WARS2-IT1:1 
HGNC Gene Symbol: WARS2-IT1    
HGNC Full Gene Name: WARS2 intronic transcript 1
Ensembl Gene ID: ENSG00000224238
Ensembl Transcript ID: ENST00000423984
Location (hg38): chr1:119047405-119064785
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2060 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT005521; ENST00000423984.2
Alternative gene names: ENSG00000224238.2; WARS2-IT1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 30.0381 non-coding 
CPAT coding probability 8.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WARS2-IT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAO2-9:1
4.0 WARS2-IT1:1
4.1 WARS2-IT1:1
5.0 WARS2-IT1:1
5.1 WARS2-IT1:1
5.2 WARS2-IT1:1