Transcript: WARS2-IT1:2

Basic information

LNCipedia transcript ID: WARS2-IT1:2 
LNCipedia gene ID: WARS2-IT1
RefSeq ID: NR_126447
Location (hg38): chr1:119047405-119063287
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 562 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126447; NR_126447.1
Alternative gene names: ; WARS2-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 15.6283 non-coding 
CPAT coding probability 4.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WARS2-IT1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-HAO2-9:2
4.0 WARS2-IT1:2
4.1 WARS2-IT1:2
5.0 WARS2-IT1:2
5.1 WARS2-IT1:2
5.2 WARS2-IT1:2