Transcript: WDFY3-AS2:3

Basic information

LNCipedia transcript ID: WDFY3-AS2:3 
LNCipedia gene ID: WDFY3-AS2
Location (hg38): chr4:84966276-84967646
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 889 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT097251
Alternative gene names: FBI4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.9367 non-coding 
CPAT coding probability 14.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WDFY3-AS2:3 yes no no no

Available literature

  1. Kehrer-Sawatzki (2005), Breakpoint analysis of the pericentric inversion distinguishing human chromosome 4 from the homologous chromosome in the chimpanzee (Pan troglodytes)., Hum. Mutat.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDS1-2:3
4.0 WDFY3-AS2:3
4.1 WDFY3-AS2:3
5.0 WDFY3-AS2:3
5.1 WDFY3-AS2:3
5.2 WDFY3-AS2:3