Transcript: WDFY3-AS2:9

Basic information

LNCipedia transcript ID: WDFY3-AS2:9 
HGNC Gene Symbol: WDFY3-AS2    
HGNC Full Gene Name: WDFY3 antisense RNA 2
Ensembl Gene ID: ENSG00000180769
Ensembl Transcript ID: ENST00000451762
Location (hg38): chr4:84967005-85011277
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5814 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000451762.3
Alternative gene names: ENSG00000180769.8; WDFY3-AS2; FBI4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -41.5973 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WDFY3-AS2:9 no no no no

Available literature

  1. Kehrer-Sawatzki (2005), Breakpoint analysis of the pericentric inversion distinguishing human chromosome 4 from the homologous chromosome in the chimpanzee (Pan troglodytes)., Hum. Mutat.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 WDFY3-AS2:9
4.1 WDFY3-AS2:9
5.0 WDFY3-AS2:9
5.1 WDFY3-AS2:9
5.2 WDFY3-AS2:9