Transcript: WDR7-OT1:1

Basic information

LNCipedia transcript ID: WDR7-OT1:1 
HGNC Gene Symbol: WDR7-OT1    
HGNC Full Gene Name: WDR7 overlapping transcript 1
Ensembl Gene ID: ENSG00000267225
Ensembl Transcript ID: ENST00000592032
Location (hg38): chr18:57027832-57038845
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 565 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT059430; ENST00000592032.1
Alternative gene names: ENSG00000267225.1; WDR7-OT1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -760.4889 non-coding 
CPAT coding probability 0.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WDR7-OT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR7-2:3
4.0 WDR7-OT1:1
4.1 WDR7-OT1:1
5.0 WDR7-OT1:1
5.1 WDR7-OT1:1
5.2 WDR7-OT1:1