Transcript: WDR7-OT1:2

Basic information

LNCipedia transcript ID: WDR7-OT1:2 
LNCipedia gene ID: WDR7-OT1
Location (hg38): chr18:57029950-57041622
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 429 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026339; NONHSAT059431
Alternative gene names: XLOC_012688; linc-ST8SIA3-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -162.2167 non-coding 
CPAT coding probability 4.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WDR7-OT1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR7-2:1
3.1 lnc-WDR7-2:1
4.0 WDR7-OT1:2
4.1 WDR7-OT1:2
5.0 WDR7-OT1:2
5.1 WDR7-OT1:2
5.2 WDR7-OT1:2