Transcript: WDR86-AS1:5

Basic information

LNCipedia transcript ID: WDR86-AS1:5 
LNCipedia gene ID: WDR86-AS1
Location (hg38): chr7:151409236-151413046
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 787 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT124217
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -58.583 non-coding 
CPAT coding probability 70.43% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
WDR86-AS1:5 no no no no

Available literature

  1. Hou (2014), Long noncoding RNAs expression patterns associated with chemo response to cisplatin based chemotherapy in lung squamous cell carcinoma patients., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NUB1-1:9
4.0 WDR86-AS1:5
4.1 WDR86-AS1:5
5.0 WDR86-AS1:5
5.1 WDR86-AS1:5
5.2 WDR86-AS1:5