Transcript: WEE2-AS1:5

Basic information

LNCipedia transcript ID: WEE2-AS1:5 
HGNC Gene Symbol: WEE2-AS1    
HGNC Full Gene Name: WEE2 antisense RNA 1
Ensembl Gene ID: ENSG00000228775
Ensembl Transcript ID: ENST00000488785
RefSeq ID: NR_015392
Location (hg38): chr7:141704338-141738230
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2262 bp
Exons: 7
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000488785; ENST00000488785.1; RP5-894A10.5-001; OTTHUMT00000349094.1; NONHSAT123731; NR_015392; ENST00000488785.5; NR_015392.1
Alternative gene names: ENSG00000228775; RP5-894A10.5; ENSG00000228775.3; OTTHUMG00000157538.1; WEE2-AS1; ENSG00000228775.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.2397 non-coding 
CPAT coding probability 34.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
WEE2-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA1147-1:5
3.1 lnc-KIAA1147-2:6
4.0 WEE2-AS1:5
4.1 WEE2-AS1:5
5.0 WEE2-AS1:5
5.1 WEE2-AS1:5
5.2 WEE2-AS1:5