Transcript: XIST:12

Basic information

LNCipedia transcript ID: XIST:12 
LNCipedia gene ID: XIST
Location (hg38): chrX:73821839-73841675
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2979 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT137553
Alternative gene names: NCRNA00001; DXS1089; swd66; LINC00001


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -111.3025 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
XIST:12 no no no no

Available literature

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LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAP1L2-1:20
4.0 XIST:12
4.1 XIST:12
5.0 XIST:12
5.1 XIST:12
5.2 XIST:12