Transcript: XIST:17

Basic information

LNCipedia transcript ID: XIST:17 
LNCipedia gene ID: XIST
Location (hg38): chrX:73823079-73832110
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6115 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT137555
Alternative gene names: NCRNA00001; DXS1089; swd66; LINC00001


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.459 non-coding 
CPAT coding probability 1.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
XIST:17 no no no no

Available literature

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LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NAP1L2-1:24
4.0 XIST:17
4.1 XIST:17
5.0 XIST:17
5.1 XIST:17
5.2 XIST:17