Transcript: YEATS2-AS1:1

Basic information

LNCipedia transcript ID: YEATS2-AS1:1 
HGNC Gene Symbol: YEATS2-AS1    
HGNC Full Gene Name: YEATS2 antisense RNA 1
Ensembl Gene ID: ENSG00000233885
Ensembl Transcript ID: ENST00000609195
Location (hg38): chr3:183807908-183810783
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1093 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609195.1
Alternative gene names: ENSG00000233885.3; YEATS2-AS1; ENSG00000233885.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 103.9393 coding 
CPAT coding probability 31.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
YEATS2-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP6D1-1:2
4.0 YEATS2-AS1:1
4.1 YEATS2-AS1:1
5.0 YEATS2-AS1:1
5.1 YEATS2-AS1:1
5.2 YEATS2-AS1:1