Transcript: YEATS2-AS1:4

Basic information

LNCipedia transcript ID: YEATS2-AS1:4 
HGNC Gene Symbol: YEATS2-AS1    
HGNC Full Gene Name: YEATS2 antisense RNA 1
Ensembl Gene ID: ENSG00000233885
Ensembl Transcript ID: ENST00000625709
Location (hg38): chr3:183807908-183809409
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 949 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000625709.1
Alternative gene names: ENSG00000233885.7; YEATS2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -56.5021 non-coding 
CPAT coding probability 46.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
YEATS2-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 YEATS2-AS1:4
4.1 YEATS2-AS1:4
5.0 YEATS2-AS1:4
5.1 YEATS2-AS1:4
5.2 YEATS2-AS1:4