Transcript: YEATS2-AS1:5

Basic information

LNCipedia transcript ID: YEATS2-AS1:5 
LNCipedia gene ID: YEATS2-AS1
Location (hg38): chr3:183807764-183808941
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 561 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000425008.1; YEATS2-AS1-001; OTTHUMT00000346515.1
Alternative gene names: ENSG00000233885.1; YEATS2-AS1; OTTHUMG00000156899.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.5021 non-coding 
CPAT coding probability 11.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
YEATS2-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MAP6D1-1:1
4.0 YEATS2-AS1:5
4.1 YEATS2-AS1:5
5.0 YEATS2-AS1:5
5.1 YEATS2-AS1:5
5.2 YEATS2-AS1:5