Transcript: ZBED5-AS1:11

Basic information

LNCipedia transcript ID: ZBED5-AS1:11 
HGNC Gene Symbol: ZBED5-AS1    
HGNC Full Gene Name: ZBED5 antisense RNA 1
Ensembl Gene ID: ENSG00000247271
Ensembl Transcript ID: ENST00000530344
Location (hg38): chr11:10865261-10906802
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 415 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000530344; ENST00000530344.1; CTD-2003C8.1-003; OTTHUMT00000386900.1
Alternative gene names: ENSG00000247271; CTD-2003C8.1; ENSG00000247271.2; OTTHUMG00000165888.1; ZBED5-AS1; ENSG00000247271.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.9457 non-coding 
CPAT coding probability 1.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZBED5-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTR9-3:7
3.1 lnc-CTR9-3:7
4.0 ZBED5-AS1:11
4.1 ZBED5-AS1:11
5.0 ZBED5-AS1:11
5.1 ZBED5-AS1:11
5.2 ZBED5-AS1:11