Transcript: ZBED5-AS1:13

Basic information

LNCipedia transcript ID: ZBED5-AS1:13 
LNCipedia gene ID: ZBED5-AS1
Location (hg38): chr11:10899263-10906829
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 403 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019235; NONHSAT018010
Alternative gene names: XLOC_009065; linc-USP47-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -112.9457 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZBED5-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CTR9-3:9
3.1 lnc-CTR9-3:9
4.0 ZBED5-AS1:13
4.1 ZBED5-AS1:13
5.0 ZBED5-AS1:13
5.1 ZBED5-AS1:13
5.2 ZBED5-AS1:13