Transcript: ZBTB20-AS5:7

Basic information

LNCipedia transcript ID: ZBTB20-AS5:7 
HGNC Gene Symbol: ZBTB20-AS5    
HGNC Full Gene Name: ZBTB20 antisense RNA 5
Ensembl Gene ID: ENSG00000242290
Ensembl Transcript ID: ENST00000627586
Location (hg38): chr3:114519666-114529452
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 611 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000627586.1
Alternative gene names: ENSG00000242290.2; RP11-197K3.1; ZBTB20-AS5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -248.1599 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZBTB20-AS5:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-TIGIT-3:3
4.1 lnc-TIGIT-3:3
5.0 lnc-TIGIT-3:3
5.1 ZBTB20-AS5:4
5.2 ZBTB20-AS5:7