Transcript: ZFHX4-AS1:4

Basic information

LNCipedia transcript ID: ZFHX4-AS1:4 
HGNC Gene Symbol: ZFHX4-AS1    
HGNC Full Gene Name: ZFHX4 antisense RNA 1
Ensembl Gene ID: ENSG00000253661
Ensembl Transcript ID: ENST00000522961
Location (hg38): chr8:76491200-76683156
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 240 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000522961; ENST00000522961.1; RP11-65D13.1-005; OTTHUMT00000379190.1; NONHSAT127333
Alternative gene names: ENSG00000253661; RP11-65D13.1; ENSG00000253661.1; OTTHUMG00000164554.1; ZFHX4-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -134.1972 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZFHX4-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PEX2-1:2
3.1 lnc-PEX2-1:2
4.0 ZFHX4-AS1:4
4.1 ZFHX4-AS1:4
5.0 ZFHX4-AS1:4
5.1 ZFHX4-AS1:4
5.2 ZFHX4-AS1:4