Transcript: ZFPM2-AS1:7

Basic information

LNCipedia transcript ID: ZFPM2-AS1:7 
HGNC Gene Symbol: ZFPM2-AS1    
HGNC Full Gene Name: ZFPM2 antisense RNA 1
Ensembl Gene ID: ENSG00000251003
Ensembl Transcript ID: ENST00000524045
Location (hg38): chr8:105784805-106060477
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 987 bp
Exons: 6
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000524045.2; ENST00000524045.6
Alternative gene names: ENSG00000251003.3; RP11-152P17.2; ENSG00000251003.7; ZFPM2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.1835 non-coding 
CPAT coding probability 3.34% non-coding 
Bazzini small ORFs 1 coding 
covF1Prop0.130434783
seqAAMNPPAEIPVHILSTKNLNLKEFWCW
orfFrame6.22881869

In stringent set: no

Locus conservation

Locus conservation?
ZFPM2-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-778D12.2.1-4:8
4.0 ZFPM2-AS1:7
4.1 ZFPM2-AS1:7
5.0 ZFPM2-AS1:7
5.1 ZFPM2-AS1:7
5.2 ZFPM2-AS1:7