Transcript: ZMIZ1-AS1:1

Basic information

LNCipedia transcript ID: ZMIZ1-AS1:1 
LNCipedia gene ID: ZMIZ1-AS1
Location (hg38): chr10:79056024-79069060
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 381 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000455378; ENST00000455378.1; RP11-202P11.1-003; OTTHUMT00000048942.1; NONHSAT015095
Alternative gene names: ENSG00000224596; RP11-202P11.1; ENSG00000224596.1; OTTHUMG00000018559.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.5552 non-coding 
CPAT coding probability 11.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZMIZ1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZCCHC24-3:1
3.1 lnc-ZCCHC24-3:1
4.0 ZMIZ1-AS1:1
4.1 ZMIZ1-AS1:1
5.0 ZMIZ1-AS1:1
5.1 ZMIZ1-AS1:1
5.2 ZMIZ1-AS1:1