Transcript: ZMIZ1-AS1:3

Basic information

LNCipedia transcript ID: ZMIZ1-AS1:3 
HGNC Gene Symbol: ZMIZ1-AS1    
HGNC Full Gene Name: ZMIZ1 antisense RNA 1
Ensembl Gene ID: ENSG00000224596
Ensembl Transcript ID: ENST00000456353
Location (hg38): chr10:78943328-79067895
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2878 bp
Exons: 10
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456353; ENST00000456353.1; RP11-202P11.1-001; OTTHUMT00000048940.1; NONHSAT015089; ENST00000456353.5
Alternative gene names: ENSG00000224596; RP11-202P11.1; ENSG00000224596.1; OTTHUMG00000018559.1; ENSG00000224596.3; ZMIZ1-AS1; ENSG00000224596.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.1117 non-coding 
CPAT coding probability 20.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZMIZ1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZCCHC24-3:2
3.1 lnc-ZCCHC24-3:2
4.0 ZMIZ1-AS1:3
4.1 ZMIZ1-AS1:3
5.0 ZMIZ1-AS1:3
5.1 ZMIZ1-AS1:3
5.2 ZMIZ1-AS1:3