Transcript: ZNF236-DT:16

Basic information

LNCipedia transcript ID: ZNF236-DT:16 
LNCipedia gene ID: ZNF236-DT
Location (hg38): chr18:76816109-76822286
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 422 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026577; NONHSAT059959
Alternative gene names: XLOC_012895; linc-ZNF516-4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.2925 non-coding 
CPAT coding probability 0.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF236-DT:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MBP-1:2
3.1 lnc-MBP-1:2
4.0 lnc-MBP-2:6
4.1 lnc-MBP-2:6
5.0 lnc-MBP-2:6
5.1 ZNF236-DT:5
5.2 ZNF236-DT:16