Transcript: ZNF236-DT:21

Basic information

LNCipedia transcript ID: ZNF236-DT:21 
LNCipedia gene ID: ZNF236-DT
Location (hg38): chr18:76805453-76809801
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4116 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026576; NONHSAT059956
Alternative gene names: XLOC_012894; linc-ZNF516-3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.4145 non-coding 
CPAT coding probability 3.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF236-DT:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MBP-2:1
3.1 lnc-MBP-2:1
4.0 lnc-MBP-2:1
4.1 lnc-MBP-2:1
5.0 lnc-MBP-2:1
5.1 ZNF236-DT:10
5.2 ZNF236-DT:21