Transcript: ZNF236-DT:23

Basic information

LNCipedia transcript ID: ZNF236-DT:23 
LNCipedia gene ID: ZNF236-DT
Ensembl Gene ID: ENSG00000278107
Ensembl Transcript ID: ENST00000622010
Location (hg38): chr18:76805151-76805736
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 586 bp
Exons: 1
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622010.1
Alternative gene names: ENSG00000278107.1; RP11-162A12.4; AC027575.4; AC027575.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -15.4182 non-coding 
CPAT coding probability 1.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF236-DT:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MBP-2:11
4.1 lnc-MBP-2:11
5.0 lnc-MBP-2:11
5.1 ZNF236-DT:12
5.2 ZNF236-DT:23