Transcript: ZNF295-AS1:11

Basic information

LNCipedia transcript ID: ZNF295-AS1:11 
LNCipedia gene ID: ZNF295-AS1
RefSeq ID: NR_027273
Location (hg38): chr21:42022269-42024920
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 777 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027273; NR_027273.2
Alternative gene names: PRED87; ZNF295-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -12.1359 non-coding 
CPAT coding probability 18.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF295-AS1:11 no no no no

Available literature

  1. Ding (2017), Microarray expression profiling of long non-coding RNAs in epithelial ovarian cancer., Oncol Lett


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-UMODL1-2:11
4.0 ZNF295-AS1:11
4.1 ZNF295-AS1:11
5.0 ZNF295-AS1:11
5.1 ZNF295-AS1:11
5.2 ZNF295-AS1:11