Transcript: ZNF32-AS3:1

Basic information

LNCipedia transcript ID: ZNF32-AS3:1 
HGNC Gene Symbol: ZNF32-AS3    
HGNC Full Gene Name: ZNF32 antisense RNA 3
Ensembl Gene ID: ENSG00000223910
Ensembl Transcript ID: ENST00000458063
Location (hg38): chr10:43628817-43674703
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1932 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000458063.1; ZNF32-AS3-001; OTTHUMT00000047716.1; NONHSAT012977
Alternative gene names: ENSG00000223910.1; ZNF32-AS3; OTTHUMG00000018037.1; bA402L1.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.6356 non-coding 
CPAT coding probability 1.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF32-AS3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF485-4:1
4.0 ZNF32-AS3:1
4.1 ZNF32-AS3:1
5.0 ZNF32-AS3:1
5.1 ZNF32-AS3:1
5.2 ZNF32-AS3:1