Transcript: ZNF426-DT:20

Basic information

LNCipedia transcript ID: ZNF426-DT:20 
LNCipedia gene ID: ZNF426-DT
Location (hg38): chr19:9538733-9539726
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 587 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011
Alternative transcript names: ENST00000455223
Alternative gene names: ENSG00000247585; AC008567.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.6764 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF426-DT:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF177-2:1
3.1 lnc-ZNF177-2:1
4.0 lnc-ZNF177-2:1
4.1 lnc-ZNF177-2:1
5.0 lnc-ZNF177-2:1
5.1 ZNF426-DT:9
5.2 ZNF426-DT:20