Transcript: ZNF451-AS1:30

Basic information

LNCipedia transcript ID: ZNF451-AS1:30 
LNCipedia gene ID: ZNF451-AS1
Location (hg38): chr6:57114911-57172396
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 873 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000416069; ENST00000416069.1; RP11-203B9.4-001; OTTHUMT00000041041.1
Alternative gene names: ENSG00000226803; RP11-203B9.4; ENSG00000226803.1; OTTHUMG00000014917.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -1.314 non-coding 
CPAT coding probability 0.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF451-AS1:30 no no no no

Available literature

  1. Zhang (2018), LncRNA BC032020 suppresses the survival of human pancreatic ductal adenocarcinoma cells by targeting ZNF451., Int. J. Oncol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RAB23-2:1
3.1 lnc-RAB23-2:1
4.0 lnc-RAB23-2:1
4.1 lnc-RAB23-2:1
5.0 lnc-RAB23-2:1
5.1 ZNF451-AS1:6
5.2 ZNF451-AS1:30