Transcript: ZNF503-AS2:12

Basic information

LNCipedia transcript ID: ZNF503-AS2:12 
HGNC Gene Symbol: ZNF503-AS2    
HGNC Full Gene Name: ZNF503 antisense RNA 2
Ensembl Gene ID: ENSG00000237149
Ensembl Transcript ID: ENST00000527641
Location (hg38): chr10:75404165-75407694
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 560 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT014108; ENST00000527641.1
Alternative gene names: ENSG00000237149.4; ZNF503-AS2; ENSG00000237149.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.0676 non-coding 
CPAT coding probability 5.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF503-AS2:12 no no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC010997.1-1:12
4.0 ZNF503-AS2:12
4.1 ZNF503-AS2:12
5.0 ZNF503-AS2:12
5.1 ZNF503-AS2:12
5.2 ZNF503-AS2:12