Transcript: ZNF503-AS2:36

Basic information

LNCipedia transcript ID: ZNF503-AS2:36 
LNCipedia gene ID: ZNF503-AS2
Ensembl Gene ID: ENSG00000272692
Ensembl Transcript ID: ENST00000609200
Location (hg38): chr10:75409157-75411842
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1890 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609200.1
Alternative gene names: ENSG00000272692.1; RP11-399K21.14; ; AC010997.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -118.7643 non-coding 
CPAT coding probability 19.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF503-AS2:36 no no no no

Available literature

  1. Wang (2015), Multidrug-Resistance Related Long Non-Coding RNA Expression Profile Analysis of Gastric Cancer., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF503-AS2-2:3
4.0 lnc-ZNF503-AS2-2:3
4.1 ZNF503-AS2:36
5.0 ZNF503-AS2:36
5.1 ZNF503-AS2:36
5.2 ZNF503-AS2:36