Transcript: ZNF561-AS1:10

Basic information

LNCipedia transcript ID: ZNF561-AS1:10 
HGNC Gene Symbol: ZNF561-AS1    
HGNC Full Gene Name: ZNF561 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000267106
Ensembl Transcript ID: ENST00000616951
Location (hg38): chr19:9621553-9632372
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 315 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616951.1
Alternative gene names: ENSG00000267106.5; ZNF561-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -1.9005 non-coding 
CPAT coding probability 15.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF561-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 ZNF561-AS1:10
4.1 ZNF561-AS1:10
5.0 ZNF561-AS1:10
5.1 ZNF561-AS1:10
5.2 ZNF561-AS1:10