Transcript: ZNF667-AS1:12

Basic information

LNCipedia transcript ID: ZNF667-AS1:12 
HGNC Gene Symbol: ZNF667-AS1    
HGNC Full Gene Name: ZNF667 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000166770
Ensembl Transcript ID: ENST00000591797
Location (hg38): chr19:56478190-56494319
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 535 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT068163; ENST00000591797.1
Alternative gene names: ENSG00000166770.6; ZNF667-AS1; ENSG00000166770.10; ; MORT


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -44.2683 non-coding 
CPAT coding probability 11.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF667-AS1:12 no no no no

Available literature

  1. Vrba (2018), Epigenetic silencing of lncRNA <i>MORT</i> in 16 TCGA cancer types., F1000Res
  2. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.
  3. Vrba (2015), A lincRNA connected to cell mortality and epigenetically-silenced in most common human cancers., Epigenetics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004696.1-1:11
4.0 ZNF667-AS1:12
4.1 ZNF667-AS1:12
5.0 ZNF667-AS1:12
5.1 ZNF667-AS1:12
5.2 ZNF667-AS1:12