Transcript: ZNF674-AS1:1

Basic information

LNCipedia transcript ID: ZNF674-AS1:1 
LNCipedia gene ID: ZNF674-AS1
RefSeq ID: NR_015378
Location (hg38): chrX:46545490-46548475
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2148 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT136839; NR_015378; NR_015378.3
Alternative gene names: ; ZNF674-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.6005 non-coding 
CPAT coding probability 1.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF674-AS1:1 no no no no

Available literature

  1. Zhang (2016), Expression and Clinical Significance of the Novel Long Noncoding RNA ZNF674-AS1 in Human Hepatocellular Carcinoma., Biomed Res Int
  2. Zhu (2014), The long noncoding RNA expression profile of hepatocellular carcinoma identified by microarray analysis., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHST7-1:3
4.0 ZNF674-AS1:1
4.1 ZNF674-AS1:1
5.0 ZNF674-AS1:1
5.1 ZNF674-AS1:1
5.2 ZNF674-AS1:1