Transcript: ZNF674-AS1:5

Basic information

LNCipedia transcript ID: ZNF674-AS1:5 
HGNC Gene Symbol: ZNF674-AS1    
HGNC Full Gene Name: ZNF674 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000230844
Ensembl Transcript ID: ENST00000609887
Location (hg38): chrX:46545511-46547881
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 672 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609887.1
Alternative gene names: ENSG00000230844.2; ZNF674-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.6005 non-coding 
CPAT coding probability 1.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF674-AS1:5 no no no no

Available literature

  1. Zhang (2016), Expression and Clinical Significance of the Novel Long Noncoding RNA ZNF674-AS1 in Human Hepatocellular Carcinoma., Biomed Res Int
  2. Zhu (2014), The long noncoding RNA expression profile of hepatocellular carcinoma identified by microarray analysis., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CHST7-1:5
4.0 ZNF674-AS1:5
4.1 ZNF674-AS1:5
5.0 ZNF674-AS1:5
5.1 ZNF674-AS1:5
5.2 ZNF674-AS1:5