Transcript: ZNF793-AS1:6

Basic information

LNCipedia transcript ID: ZNF793-AS1:6 
HGNC Gene Symbol: ZNF793-AS1    
HGNC Full Gene Name: ZNF793 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000266916
Ensembl Transcript ID: ENST00000589025
Location (hg38): chr19:37497357-37506967
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 560 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000589025.1; ENST00000589025.5
Alternative gene names: ENSG00000266916.1; CTD-3064H18.1; ENSG00000266916.5; ZNF793-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -48.1142 non-coding 
CPAT coding probability 0.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNF793-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF569-5:4
4.0 ZNF793-AS1:6
4.1 ZNF793-AS1:6
5.0 ZNF793-AS1:6
5.1 ZNF793-AS1:6
5.2 ZNF793-AS1:6