Transcript: ZNRF3-AS1:1

Basic information

LNCipedia transcript ID: ZNRF3-AS1:1 
HGNC Gene Symbol: ZNRF3-AS1    
HGNC Full Gene Name: ZNRF3 antisense RNA 1
Ensembl Gene ID: ENSG00000177993
Ensembl Transcript ID: ENST00000325660
RefSeq ID: NR_046851
Location (hg38): chr22:29024999-29031476
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2170 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000325660; ENST00000325660.3; ZNRF3-AS1-001; OTTHUMT00000331448.1; NONHSAT084665; NR_046851; NR_046851.1
Alternative gene names: ENSG00000177993; ZNRF3-AS1; ENSG00000177993.3; OTTHUMG00000153511.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -45.0446 non-coding 
CPAT coding probability 12.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZNRF3-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C22orf31-1:1
3.1 lnc-C22orf31-1:1
4.0 ZNRF3-AS1:1
4.1 ZNRF3-AS1:1
5.0 ZNRF3-AS1:1
5.1 ZNRF3-AS1:1
5.2 ZNRF3-AS1:1