Transcript: ZSCAN16-AS1:2

Basic information

LNCipedia transcript ID: ZSCAN16-AS1:2 
LNCipedia gene ID: ZSCAN16-AS1
RefSeq ID: NR_103456
Location (hg38): chr6:28121795-28137316
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1989 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT108436; NR_103456; NR_103456.1
Alternative gene names: ; ZSCAN16-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.8002 non-coding 
CPAT coding probability 22.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZSCAN16-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZKSCAN4-1:3
4.0 ZSCAN16-AS1:2
4.1 ZSCAN16-AS1:2
5.0 ZSCAN16-AS1:2
5.1 ZSCAN16-AS1:2
5.2 ZSCAN16-AS1:2