Transcript: ZSCAN16-AS1:4

Basic information

LNCipedia transcript ID: ZSCAN16-AS1:4 
LNCipedia gene ID: ZSCAN16-AS1
Location (hg38): chr6:28121817-28136866
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1517 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000510652
Alternative gene names: ENSG00000224024;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.8002 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZSCAN16-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZKSCAN4-1:2
3.1 lnc-ZKSCAN4-1:2
4.0 ZSCAN16-AS1:4
4.1 ZSCAN16-AS1:4
5.0 ZSCAN16-AS1:4
5.1 ZSCAN16-AS1:4
5.2 ZSCAN16-AS1:4