Transcript: ZSCAN16-AS1:6

Basic information

LNCipedia transcript ID: ZSCAN16-AS1:6 
LNCipedia gene ID: ZSCAN16-AS1
Location (hg38): chr6:28091100-28136824
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 449 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT108426
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -16.0735 non-coding 
CPAT coding probability 10.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ZSCAN16-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZKSCAN4-1:7
4.0 ZSCAN16-AS1:6
4.1 ZSCAN16-AS1:6
5.0 ZSCAN16-AS1:6
5.1 ZSCAN16-AS1:6
5.2 ZSCAN16-AS1:6