Transcript: ZSWIM8-AS1:2

Basic information

LNCipedia transcript ID: ZSWIM8-AS1:2 
LNCipedia gene ID: ZSWIM8-AS1
Location (hg38): chr10:73796518-73801399
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1456 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000456638.1; RP11-574K11.16-001; OTTHUMT00000048706.1
Alternative gene names: ENSG00000236370.1; RP11-574K11.16; OTTHUMG00000018487.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 69.9331 coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ZSWIM8-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDST2-1:1
4.0 ZSWIM8-AS1:2
4.1 ZSWIM8-AS1:2
5.0 ZSWIM8-AS1:2
5.1 ZSWIM8-AS1:2
5.2 ZSWIM8-AS1:2