Transcript: ZSWIM8-AS1:3

Basic information

LNCipedia transcript ID: ZSWIM8-AS1:3 
HGNC Gene Symbol: ZSWIM8-AS1    
HGNC Full Gene Name: ZSWIM8 antisense RNA 1
Ensembl Gene ID: ENSG00000272589
Ensembl Transcript ID: ENST00000456638
RefSeq ID: NR_038357
Location (hg38): chr10:73796514-73801399
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1460 bp
Exons: 4
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT014028; NR_038357; ENST00000456638.2; NR_038357.1
Alternative gene names: ENSG00000272589.1; ZSWIM8-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 69.9331 coding 
CPAT coding probability 0.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ZSWIM8-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NDST2-1:3
4.0 ZSWIM8-AS1:3
4.1 ZSWIM8-AS1:3
5.0 ZSWIM8-AS1:3
5.1 ZSWIM8-AS1:3
5.2 ZSWIM8-AS1:3