Transcript: lnc-A1CF-8:3

Basic information

LNCipedia transcript ID: lnc-A1CF-8:3 
LNCipedia gene ID: lnc-A1CF-8
Location (hg38): chr10:50991089-50991708
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 620 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000118087.1|FTMT23800002908.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 102.1634 coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-A1CF-8:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-A1CF-8:3
5.0 lnc-A1CF-8:3
5.1 lnc-CSTF2T-8:3
5.2 lnc-A1CF-8:3