Transcript: lnc-A4GALT-2:2

Basic information

LNCipedia transcript ID: lnc-A4GALT-2:2 
LNCipedia gene ID: lnc-A4GALT-2
Location (hg38): chr22:42693971-42695633
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 515 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087078
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.0212 non-coding 
CPAT coding probability 1.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-A4GALT-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CYB5R3-2:2
4.0 lnc-A4GALT-2:2
4.1 lnc-A4GALT-2:2
5.0 lnc-A4GALT-2:2
5.1 lnc-TCF20-9:2
5.2 lnc-A4GALT-2:2